Message 2002-02-0007: Re: interesting style of definition

Fri, 15 Feb 2002 12:07:40 +0100

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Date: Fri, 15 Feb 2002 12:07:40 +0100
From: Mieczyslaw Wolsan <wolsan@twarda.pan.pl>
To: PhyloCode@ouvaxa.cats.ohiou.edu, phyloadvisors@ouvaxa.cats.ohiou.edu
Subject: Re: interesting style of definition

1) "extant"

This problem has already been addressed comprehensively in the literature 
(see, e.g., Bryant 1996, Syst. Biol. 45: 174-189).

2) "stemming"

If clade A stems from B, is it necessary for clade A to contain B? I feel 
it is not. And this is my point. Of course, a clade consists of an ancestor 
and all its descendants. The problem I find with the discussed definition 
is that it is not clear (for me) whether the specified "last common 
ancestor" is contained in the clade. If I correctly recognize the meaning 
of the word "stemming" , the phrasing "clade A stemming from B" referes to 
two different clades: one containing B, and the other without B.

3) "ancestor"

There has been much discussion related to the problem, also on the list 
(recently by Kevin de Queiroz, as far as I remember). The draft PhyloCode 
defines the term "clade" as "a group of species comprising a common 
ancestor and all of its descendants". (I would say "a group of lineages" 
and would replace the word "comprising" by "composed of" because I feel the 
word "comprise" meant to contain or include, but not to constitute or to 
compose.) I think that the majority of systematists agree with the draft 
PhyloCode's definition. However, I do not think that according to this 
definition it is necessary for the ancestor to be a species. I think many 
systematists agree that it is not necessary for a clade to begin with a 
complete species. If one wishes to have a species as an ancestor, this 
should be explicitly stated in the definition.

Mieczyslaw






2) [Does this include the ancestor?] The wording related by Mike Keesey is
perhaps cumbersome, but it does explicitly include the ancestor: "the CLADE
stemming from the... ancestor..." where a "clade" is defined as an ancestor 
and
all of its descendants.
 > I think it does. PhyloCode uses that word, doesn't it?
In deed it does. (see www.phylocode.org <Glossary>)
clade:
"One of the two kinds of biological entities whose names are governed by 
this code; a group of species comprising a common ancestor and all of its 
descendants."
Richard Swigart











There are at least three problems with this definition. First, the clade 
referred to by the definition changes with the extinction of taxa; and this 
is the most serious problem. Second, it is not clear whether "the last 
common ancestor" is contained in the clade or not (as a non-native English 
speaker I cannot evaluate this properly, but I do not think that the word 
"stemming" specifies this unambiguously). Third, "the last common ancestor" 
may refer to either a species or a population, or a breeding pair, 
individual organism, etc.; in each instance, we have to do with a different 
clade. This might seem like extreme pedantry, but if explicitness in 
phylogenetic nomenclature is important, this should be reflected in the 
wording of phylogenetic definitions.

Mieczyslaw



Mieczyslaw Wolsan
Professor and Chair
Department of Vertebrate Paleontology
Institute of Paleobiology
Polish Academy of Sciences
Twarda 51/55
00-818 Warszawa, Poland
Phone: +48-22-697-8793
Fax: +48-22-620-6225
E-mail: wolsan@twarda.pan.pl
http://www.paleo.pan.pl


  

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